Soil microbial diversity in adjacent forest systems - contrasting native, old growth kauri (Agathis australis) forest with exotic pine (Pinus radiata) plantation forest.
Identifieur interne : 000055 ( Main/Exploration ); précédent : 000054; suivant : 000056Soil microbial diversity in adjacent forest systems - contrasting native, old growth kauri (Agathis australis) forest with exotic pine (Pinus radiata) plantation forest.
Auteurs : Alexa-Kate Byers [Nouvelle-Zélande] ; Leo Condron [Nouvelle-Zélande] ; Tom Donavan [Nouvelle-Zélande] ; Maureen O'Callaghan [Nouvelle-Zélande] ; Taoho Patuawa [Nouvelle-Zélande] ; Nick Waipara [Nouvelle-Zélande] ; Amanda Black [Nouvelle-Zélande]Source :
- FEMS microbiology ecology [ 1574-6941 ] ; 2020.
Abstract
Globally, the conversion of primary forests to plantations and agricultural landscapes is a common land use change. Kauri (Agathis australis) is one of the most heavily impacted indigenous tree species of New Zealand with <1% of primary forest remaining as fragments adjacent to pastoral farming and exotic forest plantations. By contrasting two forest systems, we investigated if the fragmentation of kauri forests and introduction of pine plantations (Pinus radiata) are significantly impacting the diversity and composition of soil microbial communities across Waipoua kauri forest, New Zealand. Using next generation based 16S rRNA and ITS gene region sequencing, we identified that fungal and bacterial community composition significantly differed between kauri and pine forest soils. However, fungal communities displayed the largest differences in diversity and composition. This research revealed significant shifts in the soil microbial communities surrounding remnant kauri fragments, including the loss of microbial taxa with functions in disease suppression and plant health. Kauri dieback disease, caused by Phytophthora agathidicida, currently threatens the kauri forest ecosystem. Results from this research highlight the need for further investigations into how changes to soil microbial diversity surrounding remnant kauri fragments impact tree health and disease expression.
DOI: 10.1093/femsec/fiaa047
PubMed: 32179899
PubMed Central: PMC7161737
Affiliations:
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Box 85084, Lincoln 7674, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Bio-Protection Research Centre, Lincoln University, P.O. Box 85084, Lincoln 7674</wicri:regionArea><wicri:noRegion>Lincoln 7674</wicri:noRegion></affiliation></author><author><name sortKey="Condron, Leo" sort="Condron, Leo" uniqKey="Condron L" first="Leo" last="Condron">Leo Condron</name><affiliation wicri:level="1"><nlm:affiliation>Faculty of Agriculture and Life Sciences, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Faculty of Agriculture and Life Sciences, Lincoln University, P.O. 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Box 85084, Lincoln 7674, New Zealand.</nlm:affiliation><country xml:lang="fr">Nouvelle-Zélande</country><wicri:regionArea>Bio-Protection Research Centre, Lincoln University, P.O. Box 85084, Lincoln 7674</wicri:regionArea><wicri:noRegion>Lincoln 7674</wicri:noRegion></affiliation></author></analytic><series><title level="j">FEMS microbiology ecology</title><idno type="eISSN">1574-6941</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Globally, the conversion of primary forests to plantations and agricultural landscapes is a common land use change. Kauri (Agathis australis) is one of the most heavily impacted indigenous tree species of New Zealand with <1% of primary forest remaining as fragments adjacent to pastoral farming and exotic forest plantations. By contrasting two forest systems, we investigated if the fragmentation of kauri forests and introduction of pine plantations (Pinus radiata) are significantly impacting the diversity and composition of soil microbial communities across Waipoua kauri forest, New Zealand. Using next generation based 16S rRNA and ITS gene region sequencing, we identified that fungal and bacterial community composition significantly differed between kauri and pine forest soils. However, fungal communities displayed the largest differences in diversity and composition. This research revealed significant shifts in the soil microbial communities surrounding remnant kauri fragments, including the loss of microbial taxa with functions in disease suppression and plant health. Kauri dieback disease, caused by Phytophthora agathidicida, currently threatens the kauri forest ecosystem. Results from this research highlight the need for further investigations into how changes to soil microbial diversity surrounding remnant kauri fragments impact tree health and disease expression.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">32179899</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>06</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1574-6941</ISSN><JournalIssue CitedMedium="Internet"><Volume>96</Volume><Issue>5</Issue><PubDate><Year>2020</Year><Month>05</Month><Day>01</Day></PubDate></JournalIssue><Title>FEMS microbiology ecology</Title><ISOAbbreviation>FEMS Microbiol Ecol</ISOAbbreviation></Journal><ArticleTitle>Soil microbial diversity in adjacent forest systems - contrasting native, old growth kauri (Agathis australis) forest with exotic pine (Pinus radiata) plantation forest.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">fiaa047</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1093/femsec/fiaa047</ELocationID><Abstract><AbstractText>Globally, the conversion of primary forests to plantations and agricultural landscapes is a common land use change. Kauri (Agathis australis) is one of the most heavily impacted indigenous tree species of New Zealand with <1% of primary forest remaining as fragments adjacent to pastoral farming and exotic forest plantations. By contrasting two forest systems, we investigated if the fragmentation of kauri forests and introduction of pine plantations (Pinus radiata) are significantly impacting the diversity and composition of soil microbial communities across Waipoua kauri forest, New Zealand. Using next generation based 16S rRNA and ITS gene region sequencing, we identified that fungal and bacterial community composition significantly differed between kauri and pine forest soils. However, fungal communities displayed the largest differences in diversity and composition. This research revealed significant shifts in the soil microbial communities surrounding remnant kauri fragments, including the loss of microbial taxa with functions in disease suppression and plant health. Kauri dieback disease, caused by Phytophthora agathidicida, currently threatens the kauri forest ecosystem. Results from this research highlight the need for further investigations into how changes to soil microbial diversity surrounding remnant kauri fragments impact tree health and disease expression.</AbstractText><CopyrightInformation>© FEMS 2020.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Byers</LastName><ForeName>Alexa-Kate</ForeName><Initials>AK</Initials><AffiliationInfo><Affiliation>Bio-Protection Research Centre, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Condron</LastName><ForeName>Leo</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Faculty of Agriculture and Life Sciences, Lincoln University, P.O. Box 85084, Lincoln 7674, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Donavan</LastName><ForeName>Tom</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Te Roroa Group, P.O. Box 6, Waimamaku 0446, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>O'Callaghan</LastName><ForeName>Maureen</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>AgResearch Limited, 1365 Springs Road, Lincoln 7674, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Patuawa</LastName><ForeName>Taoho</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Te Roroa Group, P.O. Box 6, Waimamaku 0446, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Waipara</LastName><ForeName>Nick</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Institute of Plant and Food Research, Sandringham, Auckland 1025, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Black</LastName><ForeName>Amanda</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Bio-Protection Research Centre, Lincoln University, P.O. 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sort="Condron, Leo" uniqKey="Condron L" first="Leo" last="Condron">Leo Condron</name><name sortKey="Donavan, Tom" sort="Donavan, Tom" uniqKey="Donavan T" first="Tom" last="Donavan">Tom Donavan</name><name sortKey="O Callaghan, Maureen" sort="O Callaghan, Maureen" uniqKey="O Callaghan M" first="Maureen" last="O'Callaghan">Maureen O'Callaghan</name><name sortKey="Patuawa, Taoho" sort="Patuawa, Taoho" uniqKey="Patuawa T" first="Taoho" last="Patuawa">Taoho Patuawa</name><name sortKey="Waipara, Nick" sort="Waipara, Nick" uniqKey="Waipara N" first="Nick" last="Waipara">Nick Waipara</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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